IL_5LZU_217

3D structure

PDB id

5LZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GAAAAAAUUA*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZU|1|9|G|807
5LZU|1|9|A|808
5LZU|1|9|A|809
5LZU|1|9|A|810
5LZU|1|9|A|811
5LZU|1|9|A|812
5LZU|1|9|A|813
5LZU|1|9|U|814
5LZU|1|9|U|815
5LZU|1|9|A|816
*
5LZU|1|9|U|848
5LZU|1|9|A|849
5LZU|1|9|C|850
5LZU|1|9|C|851
5LZU|1|9|G|852
5LZU|1|9|C|853
5LZU|1|9|A|854
5LZU|1|9|G|855
5LZU|1|9|C|856

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

40S ribosomal protein S4

Chain JJ

Ribosomal protein S9 (Predicted)

Chain LL

uS17

Chain WW

uS8