IL_5LZU_236
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCU*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZU_236 not in the Motif Atlas
- Homologous match to IL_4V88_444
- Geometric discrepancy: 0.1023
- The information below is about IL_4V88_444
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
5LZU|1|9|C|1230
5LZU|1|9|C|1231
5LZU|1|9|U|1232
*
5LZU|1|9|G|1526
5LZU|1|9|C|1527
5LZU|1|9|G|1528
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain QQ
- uS9
- Chain SS
- uS13
- Chain TT
- eS19
Coloring options: