IL_5LZU_237
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GG*CAC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZU_237 not in the Motif Atlas
- Homologous match to IL_4V88_445
- Geometric discrepancy: 0.1119
- The information below is about IL_4V88_445
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
5LZU|1|9|G|1235
5LZU|1|9|G|1236
*
5LZU|1|9|C|1521
5LZU|1|9|A|1522
5LZU|1|9|C|1523
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain PP
- uS19
- Chain SS
- uS13
- Chain ii
- Eukaryotic peptide chain release factor subunit 1
Coloring options: