IL_5LZU_289

3D structure

PDB id

5LZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GCUCAGCGUG*CCGUUGAACCC

Length

21 nucleotides

Bulged bases

5LZU|1|9|U|1585, 5LZU|1|9|G|1587

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZU|1|9|G|1541
5LZU|1|9|C|1542
5LZU|1|9|U|1543
5LZU|1|9|C|1544
5LZU|1|9|A|1545
5LZU|1|9|G|1546
5LZU|1|9|C|1547
5LZU|1|9|G|1548
5LZU|1|9|U|1549
5LZU|1|9|G|1550
*
5LZU|1|9|C|1582
5LZU|1|9|C|1583
5LZU|1|9|G|1584
5LZU|1|9|U|1585
5LZU|1|9|U|1586
5LZU|1|9|G|1587
5LZU|1|9|A|1588
5LZU|1|9|A|1589
5LZU|1|9|C|1590
5LZU|1|9|C|1591
5LZU|1|9|C|1592

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain DD

uS3

Chain FF

uS7

Chain QQ

uS9

Chain TT

eS19

Chain UU

uS10

Chain ZZ

eS25

Chain dd

uS14