IL_5LZV_150

3D structure

PDB id

5LZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

CGGAGCC*GGAACCUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZV|1|5|C|4739
5LZV|1|5|G|4740
5LZV|1|5|G|4743
5LZV|1|5|A|4744
5LZV|1|5|G|4745
5LZV|1|5|C|4746
5LZV|1|5|C|4747
*
5LZV|1|5|G|4953
5LZV|1|5|G|4954
5LZV|1|5|A|4955
5LZV|1|5|A|4956
5LZV|1|5|C|4957
5LZV|1|5|C|4958
5LZV|1|5|U|4959
5LZV|1|5|G|4960

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain f

eL33