IL_5LZV_183

3D structure

PDB id

5LZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

5LZV|1|9|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZV|1|9|G|130
5LZV|1|9|U|140
5LZV|1|9|A|141
5LZV|1|9|C|142
5LZV|1|9|U|143
5LZV|1|9|U|144
*
5LZV|1|9|A|175
5LZV|1|9|U|176
5LZV|1|9|G|177
5LZV|1|9|C|178
5LZV|1|9|C|179
5LZV|1|9|G|180
5LZV|1|9|A|181
5LZV|1|9|C|182

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

eS6