IL_5LZW_035

3D structure

PDB id

5LZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

5LZW|1|5|A|932, 5LZW|1|5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZW|1|5|A|732
5LZW|1|5|A|733
5LZW|1|5|G|734
5LZW|1|5|G|735
*
5LZW|1|5|C|928
5LZW|1|5|A|929
5LZW|1|5|G|930
5LZW|1|5|C|931
5LZW|1|5|A|932
5LZW|1|5|G|933
5LZW|1|5|C|934
5LZW|1|5|A|935
5LZW|1|5|G|935|||A
5LZW|1|5|C|936
5LZW|1|5|U|937

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain M

eL14

Chain S

eL20