IL_5LZW_039

3D structure

PDB id

5LZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGC

Length

19 nucleotides

Bulged bases

5LZW|1|5|G|748, 5LZW|1|5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZW|1|5|G|745
5LZW|1|5|A|746
5LZW|1|5|A|747
5LZW|1|5|G|748
5LZW|1|5|G|749
5LZW|1|5|U|750
5LZW|1|5|G|751
5LZW|1|5|G|752
5LZW|1|5|C|753
*
5LZW|1|5|G|910
5LZW|1|5|U|911
5LZW|1|5|G|912
5LZW|1|5|U|913
5LZW|1|5|U|914
5LZW|1|5|A|915
5LZW|1|5|C|916
5LZW|1|5|A|917
5LZW|1|5|G|918
5LZW|1|5|C|919

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain M

eL14

Chain S

eL20

Chain s

uL10