IL_5LZW_125

3D structure

PDB id

5LZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

GGCGAGC*GGCUCUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZW|1|5|G|4094
5LZW|1|5|G|4095
5LZW|1|5|C|4096
5LZW|1|5|G|4097
5LZW|1|5|A|4098
5LZW|1|5|G|4099
5LZW|1|5|C|4100
*
5LZW|1|5|G|4108
5LZW|1|5|G|4109
5LZW|1|5|C|4110
5LZW|1|5|U|4111
5LZW|1|5|C|4112
5LZW|1|5|U|4113
5LZW|1|5|C|4114

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

uL2

Chain G

eL8

Chain g

eL34