IL_5LZW_204
3D structure
- PDB id
- 5LZW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- GAG*CGAGGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZW_204 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.1618
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
5LZW|1|9|G|563
5LZW|1|9|A|564
5LZW|1|9|G|565
*
5LZW|1|9|C|585
5LZW|1|9|G|586
5LZW|1|9|A|587
5LZW|1|9|G|588
5LZW|1|9|G|589
5LZW|1|9|A|590
5LZW|1|9|U|591
5LZW|1|9|C|592
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain JJ
- uS4
- Chain ee
- eS30
Coloring options: