IL_5LZX_006
3D structure
- PDB id
- 5LZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.67 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZX_006 not in the Motif Atlas
- Homologous match to IL_8C3A_005
- Geometric discrepancy: 0.1764
- The information below is about IL_8C3A_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_35728.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
5LZX|1|5|C|30
5LZX|1|5|U|31
5LZX|1|5|G|32
5LZX|1|5|A|33
5LZX|1|5|A|34
5LZX|1|5|U|35
5LZX|1|5|U|36
5LZX|1|5|U|37
*
5LZX|1|5|A|44
5LZX|1|5|U|45
5LZX|1|5|U|46
5LZX|1|5|A|47
5LZX|1|5|G|48
5LZX|1|5|U|49
5LZX|1|5|C|50
5LZX|1|5|A|51
5LZX|1|5|G|52
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- eL13
- Chain N
- Ribosomal protein L15
- Chain a
- uL15
- Chain j
- Ribosomal protein L37
- Chain o
- eL42
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