IL_5LZX_039

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGC

Length

19 nucleotides

Bulged bases

5LZX|1|5|G|748, 5LZX|1|5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|5|G|745
5LZX|1|5|A|746
5LZX|1|5|A|747
5LZX|1|5|G|748
5LZX|1|5|G|749
5LZX|1|5|U|750
5LZX|1|5|G|751
5LZX|1|5|G|752
5LZX|1|5|C|753
*
5LZX|1|5|G|910
5LZX|1|5|U|911
5LZX|1|5|G|912
5LZX|1|5|U|913
5LZX|1|5|U|914
5LZX|1|5|A|915
5LZX|1|5|C|916
5LZX|1|5|A|917
5LZX|1|5|G|918
5LZX|1|5|C|919

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain M

eL14

Chain S

eL20

Chain s

uL10