IL_5LZX_239

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|9|A|1287
5LZX|1|9|U|1288
5LZX|1|9|U|1289
5LZX|1|9|G|1290
*
5LZX|1|9|C|1309
5LZX|1|9|U|1310
5LZX|1|9|C|1311
5LZX|1|9|G|1312
5LZX|1|9|A|1313
5LZX|1|9|U|1314

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain KK

eS10

Chain MM

40S ribosomal protein S12

Chain dd

uS14

Chain ff

eS31