IL_5LZX_293

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

CGCUA*UAAAAG

Length

11 nucleotides

Bulged bases

5LZX|1|9|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|9|C|1708
5LZX|1|9|G|1709
5LZX|1|9|C|1710
5LZX|1|9|U|1711
5LZX|1|9|A|1712
*
5LZX|1|9|U|1821
5LZX|1|9|A|1822
5LZX|1|9|A|1823
5LZX|1|9|A|1824
5LZX|1|9|A|1825
5LZX|1|9|G|1826

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain XX

uS12

Chain ii

Protein pelota homolog

Chain n

eL41