IL_5LZZ_043
3D structure
- PDB id
- 5LZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- CA*UCG
- Length
- 5 nucleotides
- Bulged bases
- 5LZZ|1|5|C|1210
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZZ_043 not in the Motif Atlas
- Geometric match to IL_3W3S_001
- Geometric discrepancy: 0.2177
- The information below is about IL_3W3S_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
5LZZ|1|5|C|1086
5LZZ|1|5|A|1087
*
5LZZ|1|5|U|1209
5LZZ|1|5|C|1210
5LZZ|1|5|G|1211
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain F
- uL30
Coloring options: