IL_5LZZ_183

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

5LZZ|1|9|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZZ|1|9|G|130
5LZZ|1|9|U|140
5LZZ|1|9|A|141
5LZZ|1|9|C|142
5LZZ|1|9|U|143
5LZZ|1|9|U|144
*
5LZZ|1|9|A|175
5LZZ|1|9|U|176
5LZZ|1|9|G|177
5LZZ|1|9|C|178
5LZZ|1|9|C|179
5LZZ|1|9|G|180
5LZZ|1|9|A|181
5LZZ|1|9|C|182

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

40S ribosomal protein S6