IL_5LZZ_240
3D structure
- PDB id
- 5LZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 5LZZ|1|9|C|1331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZZ_240 not in the Motif Atlas
- Homologous match to IL_4V88_450
- Geometric discrepancy: 0.1061
- The information below is about IL_4V88_450
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.2
- Basepair signature
- cWW-L-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
5LZZ|1|9|U|1329
5LZZ|1|9|G|1330
5LZZ|1|9|C|1331
5LZZ|1|9|A|1332
5LZZ|1|9|U|1333
*
5LZZ|1|9|A|1498
5LZZ|1|9|U|1499
5LZZ|1|9|G|1500
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain DD
- uS3
- Chain KK
- eS10
- Chain UU
- uS10
- Chain dd
- uS14
- Chain ii
- Protein pelota homolog
Coloring options: