IL_5LZZ_279

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CGGAGCC*GGAACCUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZZ|1|5|C|4739
5LZZ|1|5|G|4740
5LZZ|1|5|G|4743
5LZZ|1|5|A|4744
5LZZ|1|5|G|4745
5LZZ|1|5|C|4746
5LZZ|1|5|C|4747
*
5LZZ|1|5|G|4953
5LZZ|1|5|G|4954
5LZZ|1|5|A|4955
5LZZ|1|5|A|4956
5LZZ|1|5|C|4957
5LZZ|1|5|C|4958
5LZZ|1|5|U|4959
5LZZ|1|5|G|4960

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain f

eL33