IL_5LZZ_284
3D structure
- PDB id
- 5LZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- GUAUU*AAGAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZZ_284 not in the Motif Atlas
- Geometric match to IL_4LFB_065
- Geometric discrepancy: 0.2767
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
5LZZ|1|9|G|942
5LZZ|1|9|U|943
5LZZ|1|9|A|944
5LZZ|1|9|U|945
5LZZ|1|9|U|946
*
5LZZ|1|9|A|980
5LZZ|1|9|A|981
5LZZ|1|9|G|982
5LZZ|1|9|A|983
5LZZ|1|9|C|984
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain A
- uL2
- Chain BB
- 40S ribosomal protein S3a
- Chain OO
- uS11
Coloring options: