IL_5MDW_089

3D structure

PDB id

5MDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

5MDW|1|1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MDW|1|1|G|2123
5MDW|1|1|G|2124
5MDW|1|1|G|2125
5MDW|1|1|A|2126
5MDW|1|1|G|2127
*
5MDW|1|1|C|2161
5MDW|1|1|G|2162
5MDW|1|1|A|2163
5MDW|1|1|C|2164
5MDW|1|1|C|2165
5MDW|1|1|U|2166
5MDW|1|1|U|2167
5MDW|1|1|G|2168
5MDW|1|1|A|2169
5MDW|1|1|A|2170
5MDW|1|1|A|2171
5MDW|1|1|U|2172
5MDW|1|1|A|2173
5MDW|1|1|C|2174
5MDW|1|1|C|2175

Current chains

Chain 1

23S ribosomal RNA

Nearby chains