IL_5MDZ_091

3D structure

PDB id

5MDZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome (empty A site)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

5MDZ|1|1|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MDZ|1|1|G|2123
5MDZ|1|1|G|2124
5MDZ|1|1|G|2125
5MDZ|1|1|A|2126
5MDZ|1|1|G|2127
*
5MDZ|1|1|C|2161
5MDZ|1|1|G|2162
5MDZ|1|1|A|2163
5MDZ|1|1|C|2164
5MDZ|1|1|C|2165
5MDZ|1|1|U|2166
5MDZ|1|1|U|2167
5MDZ|1|1|G|2168
5MDZ|1|1|A|2169
5MDZ|1|1|A|2170
5MDZ|1|1|A|2171
5MDZ|1|1|U|2172
5MDZ|1|1|A|2173
5MDZ|1|1|C|2174
5MDZ|1|1|C|2175

Current chains

Chain 1

23S ribosomal RNA

Nearby chains