IL_5MDZ_189
3D structure
- PDB id
- 5MDZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome (empty A site)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCCAGACAGCC*GGUCGAG
- Length
- 18 nucleotides
- Bulged bases
- 5MDZ|1|1|A|1046
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MDZ|1|1|C|1043
5MDZ|1|1|C|1044
5MDZ|1|1|C|1045
5MDZ|1|1|A|1046
5MDZ|1|1|G|1047
5MDZ|1|1|A|1048
5MDZ|1|1|C|1049
5MDZ|1|1|A|1050
5MDZ|1|1|G|1051
5MDZ|1|1|C|1052
5MDZ|1|1|C|1053
*
5MDZ|1|1|G|1106
5MDZ|1|1|G|1107
5MDZ|1|1|U|1108
5MDZ|1|1|C|1109
5MDZ|1|1|G|1110
5MDZ|1|1|A|1111
5MDZ|1|1|G|1112
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L6
- Chain H
- 50S ribosomal protein L10
- Chain f
- 50S ribosomal protein L36
Coloring options: