IL_5MGA_004
3D structure
- PDB id
- 5MGA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Cpf1 endonuclease R-loop complex after DNA cleavage
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAAU*ATTA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MGA|1|B|U|11
5MGA|1|B|A|12
5MGA|1|B|A|13
5MGA|1|B|U|14
*
5MGA|1|C|DA|-14
5MGA|1|C|DT|-13
5MGA|1|C|DT|-12
5MGA|1|C|DA|-11
Current chains
- Chain B
- RNA (40-MER)
- Chain C
- DNA (26-MER)
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cpf1
Coloring options: