IL_5MGP_081

3D structure

PDB id

5MGP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUUUGAAGU*AUGGAGC

Length

17 nucleotides

Bulged bases

5MGP|1|A|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MGP|1|A|G|2128
5MGP|1|A|C|2129
5MGP|1|A|U|2130
5MGP|1|A|U|2131
5MGP|1|A|U|2132
5MGP|1|A|G|2133
5MGP|1|A|A|2134
5MGP|1|A|A|2135
5MGP|1|A|G|2136
5MGP|1|A|U|2137
*
5MGP|1|A|A|2154
5MGP|1|A|U|2155
5MGP|1|A|G|2156
5MGP|1|A|G|2157
5MGP|1|A|A|2158
5MGP|1|A|G|2159
5MGP|1|A|C|2160

Current chains

Chain A

23S ribosomal RNA

Nearby chains