3D structure

PDB id
5ML7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF L1-STALK FRAGMENT OF 23S rRNA FROM HALOARCULA MARISMORTUI
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CACUACAC*GAG
Length
11 nucleotides
Bulged bases
5ML7|1|B|A|2176
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_64842.1
Basepair signature
cWW-L-tWH-L-cWW-L-cSH
Number of instances in this motif group
1

Unit IDs

5ML7|1|B|C|2170
5ML7|1|B|A|2171
5ML7|1|B|C|2172
5ML7|1|B|U|2173
5ML7|1|B|A|2174
5ML7|1|B|C|2175
5ML7|1|B|A|2176
5ML7|1|B|C|2177
*
5ML7|1|B|G|2202
5ML7|1|B|A|2203
5ML7|1|B|G|2204

Current chains

Chain B
23S ribosomal RNA

Nearby chains

Chain A
23S ribosomal RNA

Coloring options:

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