IL_5MLC_060
3D structure
- PDB id
- 5MLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GACAAC*GGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MLC_060 not in the Motif Atlas
- Homologous match to IL_5J7L_304
- Geometric discrepancy: 0.1012
- The information below is about IL_5J7L_304
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.4
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
5MLC|1|A|G|1687
5MLC|1|A|A|1688
5MLC|1|A|C|1689
5MLC|1|A|A|1690
5MLC|1|A|A|1691
5MLC|1|A|C|1692
*
5MLC|1|A|G|2018
5MLC|1|A|G|2019
5MLC|1|A|C|2020
Current chains
- Chain A
- 23S ribosomal RNA, chloroplastic
Nearby chains
- Chain C
- 4.8S ribosomal RNA, chloroplastic
- Chain E
- 50S ribosomal protein L3, chloroplastic
- Chain P
- 50S ribosomal protein L17, chloroplastic
Coloring options: