IL_5MLC_076

3D structure

PDB id

5MLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACAG*CAUAU

Length

9 nucleotides

Bulged bases

5MLC|1|A|C|2069, 5MLC|1|A|U|2630, 5MLC|1|A|A|2631

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MLC|1|A|A|2068
5MLC|1|A|C|2069
5MLC|1|A|A|2070
5MLC|1|A|G|2071
*
5MLC|1|A|C|2628
5MLC|1|A|A|2629
5MLC|1|A|U|2630
5MLC|1|A|A|2631
5MLC|1|A|U|2632

Current chains

Chain A

23S ribosomal RNA, chloroplastic

Nearby chains

Chain 2

50S ribosomal protein L32, chloroplastic

Chain E

50S ribosomal protein L3, chloroplastic

Chain U

50S ribosomal protein L22, chloroplastic