3D structure

PDB id
5MRC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial ribosome - Class A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.25 Å

Loop

Sequence
AAAAU*AAU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5MRC|1|aa|A|725
5MRC|1|aa|A|726
5MRC|1|aa|A|727
5MRC|1|aa|A|728
5MRC|1|aa|U|729
*
5MRC|1|aa|A|807
5MRC|1|aa|A|808
5MRC|1|aa|U|809

Current chains

Chain aa
15S ribosomal RNA

Nearby chains

Chain FF
bS6m
Chain OO
uS15m
Chain RR
bS18m
Chain UU
mS23
Chain VV
mS26

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.084 s