IL_5MRE_033

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UGAUAAUA*UGUAUUAA

Length

16 nucleotides

Bulged bases

5MRE|1|A|U|1243, 5MRE|1|A|U|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|A|U|1237
5MRE|1|A|G|1238
5MRE|1|A|A|1239
5MRE|1|A|U|1240
5MRE|1|A|A|1241
5MRE|1|A|A|1242
5MRE|1|A|U|1243
5MRE|1|A|A|1244
*
5MRE|1|A|U|1268
5MRE|1|A|G|1269
5MRE|1|A|U|1270
5MRE|1|A|A|1271
5MRE|1|A|U|1272
5MRE|1|A|U|1273
5MRE|1|A|A|1274
5MRE|1|A|A|1275

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 4

mL43

Chain 5

mL44

Chain 8

mL50

Chain D

uL4m

Chain J

uL15m

Chain P

uL23m