IL_5MRE_050

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CAUAAG*CAAUAAAG

Length

14 nucleotides

Bulged bases

5MRE|1|A|U|1652

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|A|C|1638
5MRE|1|A|A|1639
5MRE|1|A|U|1640
5MRE|1|A|A|1641
5MRE|1|A|A|1642
5MRE|1|A|G|1643
*
5MRE|1|A|C|1649
5MRE|1|A|A|1650
5MRE|1|A|A|1651
5MRE|1|A|U|1652
5MRE|1|A|A|1653
5MRE|1|A|A|1654
5MRE|1|A|A|1655
5MRE|1|A|G|1656

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 11

mS38

Chain B

uL2m

Chain OO

uS15m

Chain aa

Small subunit ribosomal RNA; SSU rRNA