IL_5MRE_085
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UGUAU*AUAAG
- Length
- 10 nucleotides
- Bulged bases
- 5MRE|1|A|U|2956
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRE_085 not in the Motif Atlas
- Geometric match to IL_4V9F_094
- Geometric discrepancy: 0.1339
- The information below is about IL_4V9F_094
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_45790.2
- Basepair signature
- cWW-tSH-L-tHS-cWW
- Number of instances in this motif group
- 12
Unit IDs
5MRE|1|A|U|2954
5MRE|1|A|G|2955
5MRE|1|A|U|2956
5MRE|1|A|A|2957
5MRE|1|A|U|2958
*
5MRE|1|A|A|3054
5MRE|1|A|U|3055
5MRE|1|A|A|3056
5MRE|1|A|A|3057
5MRE|1|A|G|3058
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain C
- uL3m
- Chain I
- uL14m
- Chain L
- bL17m
- Chain M
- bL19m
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