IL_5MRE_105

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRE_105 not in the Motif Atlas

Homologous match to IL_4LFB_012

Geometric discrepancy: 0.2662

The information below is about IL_4LFB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22002.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

5MRE|1|aa|U|253
5MRE|1|aa|A|254
5MRE|1|aa|G|255
5MRE|1|aa|U|256
*
5MRE|1|aa|A|279
5MRE|1|aa|G|280

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain OO

uS15m

Chain QQ

uS17m