IL_5MRE_107

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CU*AAG

Length

5 nucleotides

Bulged bases

5MRE|1|aa|A|351

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRE_107 not in the Motif Atlas

Geometric match to IL_7RQB_059

Geometric discrepancy: 0.3131

The information below is about IL_7RQB_059

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

5MRE|1|aa|C|346
5MRE|1|aa|U|347
*
5MRE|1|aa|A|350
5MRE|1|aa|A|351
5MRE|1|aa|G|352

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain 22

mS41

Chain I

uL14m

Chain M

bL19m