IL_5MRE_111
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UUAAA*UAUUAA
- Length
- 11 nucleotides
- Bulged bases
- 5MRE|1|aa|U|531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRE_111 not in the Motif Atlas
- Geometric match to IL_5J7L_022
- Geometric discrepancy: 0.2724
- The information below is about IL_5J7L_022
- Detailed Annotation
- tSH-tHW-tWW
- Broad Annotation
- No text annotation
- Motif group
- IL_88269.4
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
5MRE|1|aa|U|517
5MRE|1|aa|U|518
5MRE|1|aa|A|519
5MRE|1|aa|A|520
5MRE|1|aa|A|521
*
5MRE|1|aa|U|529
5MRE|1|aa|A|530
5MRE|1|aa|U|531
5MRE|1|aa|U|532
5MRE|1|aa|A|533
5MRE|1|aa|A|534
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain 22
- mS41
- Chain 66
- mS45
- Chain DD
- uS4m
- Chain PP
- bS16m
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