IL_5MRE_116
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UUUAAAG*CA
- Length
- 9 nucleotides
- Bulged bases
- 5MRE|1|aa|A|681
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRE_116 not in the Motif Atlas
- Homologous match to IL_5J7L_026
- Geometric discrepancy: 0.0857
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
5MRE|1|aa|U|678
5MRE|1|aa|U|679
5MRE|1|aa|U|680
5MRE|1|aa|A|681
5MRE|1|aa|A|682
5MRE|1|aa|A|683
5MRE|1|aa|G|684
*
5MRE|1|aa|C|945
5MRE|1|aa|A|946
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain 11
- mS38
- Chain EE
- uS5m
- Chain HH
- uS8m
- Chain LL
- uS12m
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