IL_5MRE_136

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GAUAAUAAAA*UAUAAAAC

Length

18 nucleotides

Bulged bases

5MRE|1|aa|U|1280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|aa|G|1278
5MRE|1|aa|A|1279
5MRE|1|aa|U|1280
5MRE|1|aa|A|1281
5MRE|1|aa|A|1282
5MRE|1|aa|U|1283
5MRE|1|aa|A|1284
5MRE|1|aa|A|1285
5MRE|1|aa|A|1286
5MRE|1|aa|A|1287
*
5MRE|1|aa|U|1324
5MRE|1|aa|A|1325
5MRE|1|aa|U|1326
5MRE|1|aa|A|1327
5MRE|1|aa|A|1328
5MRE|1|aa|A|1329
5MRE|1|aa|A|1330
5MRE|1|aa|C|1331

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain GG

uS7m

Chain II

uS9m

Chain JJ

uS10m

Chain NN

uS14m

Chain WW

mS29

Chain YY

mS35