IL_5MRE_156

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

AAAUAAAU*AGAUAAUAUACGGAU

Length

23 nucleotides

Bulged bases

5MRE|1|A|A|951, 5MRE|1|A|A|952, 5MRE|1|A|U|953, 5MRE|1|A|U|1094, 5MRE|1|A|U|1097

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|A|A|950
5MRE|1|A|A|951
5MRE|1|A|A|952
5MRE|1|A|U|953
5MRE|1|A|A|954
5MRE|1|A|A|955
5MRE|1|A|A|956
5MRE|1|A|U|957
*
5MRE|1|A|A|1091
5MRE|1|A|G|1092
5MRE|1|A|A|1093
5MRE|1|A|U|1094
5MRE|1|A|A|1095
5MRE|1|A|A|1096
5MRE|1|A|U|1097
5MRE|1|A|A|1098
5MRE|1|A|U|1099
5MRE|1|A|A|1100
5MRE|1|A|C|1101
5MRE|1|A|G|1102
5MRE|1|A|G|1103
5MRE|1|A|A|1104
5MRE|1|A|U|1105

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 0

bL36m

Chain C

uL3m

Chain H

uL13m

Chain K

uL16m

Chain c

mL60