IL_5MRF_034
3D structure
- PDB id
- 5MRF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.97 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRF_034 not in the Motif Atlas
- Homologous match to IL_5J7L_289
- Geometric discrepancy: 0.0993
- The information below is about IL_5J7L_289
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
5MRF|1|A|A|1295
5MRF|1|A|U|1296
5MRF|1|A|G|1297
5MRF|1|A|A|1298
5MRF|1|A|G|1299
5MRF|1|A|U|1300
5MRF|1|A|A|1301
5MRF|1|A|A|1302
*
5MRF|1|A|U|1911
5MRF|1|A|G|1912
5MRF|1|A|A|1913
5MRF|1|A|A|1914
5MRF|1|A|A|1915
5MRF|1|A|U|1916
5MRF|1|A|U|1917
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 3
- mL41
- Chain D
- uL4m
- Chain O
- uL22m
- Chain W
- bL32m
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