IL_5MRF_103

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRF_103 not in the Motif Atlas

Homologous match to IL_4LFB_012

Geometric discrepancy: 0.2669

The information below is about IL_4LFB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22002.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

5MRF|1|aa|U|253
5MRF|1|aa|A|254
5MRF|1|aa|G|255
5MRF|1|aa|U|256
*
5MRF|1|aa|A|279
5MRF|1|aa|G|280

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain OO

uS15m

Chain QQ

uS17m