IL_5MRF_154

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

AAAUAAAU*AGAUAAUAUACGGAU

Length

23 nucleotides

Bulged bases

5MRF|1|A|A|951, 5MRF|1|A|A|952, 5MRF|1|A|U|953, 5MRF|1|A|U|1094, 5MRF|1|A|U|1097

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRF|1|A|A|950
5MRF|1|A|A|951
5MRF|1|A|A|952
5MRF|1|A|U|953
5MRF|1|A|A|954
5MRF|1|A|A|955
5MRF|1|A|A|956
5MRF|1|A|U|957
*
5MRF|1|A|A|1091
5MRF|1|A|G|1092
5MRF|1|A|A|1093
5MRF|1|A|U|1094
5MRF|1|A|A|1095
5MRF|1|A|A|1096
5MRF|1|A|U|1097
5MRF|1|A|A|1098
5MRF|1|A|U|1099
5MRF|1|A|A|1100
5MRF|1|A|C|1101
5MRF|1|A|G|1102
5MRF|1|A|G|1103
5MRF|1|A|A|1104
5MRF|1|A|U|1105

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 0

bL36m

Chain C

uL3m

Chain H

uL13m

Chain K

uL16m

Chain c

mL60