IL_5ND9_197

3D structure

PDB id

5ND9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hibernating ribosome from Staphylococcus aureus (Rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAU*AUCAG

Length

9 nucleotides

Bulged bases

5ND9|1|A|A|176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ND9|1|A|C|152
5ND9|1|A|G|153
5ND9|1|A|A|154
5ND9|1|A|U|155
*
5ND9|1|A|A|173
5ND9|1|A|U|174
5ND9|1|A|C|175
5ND9|1|A|A|176
5ND9|1|A|G|177

Current chains

Chain A

23S ribosomal RNA

Nearby chains