IL_5NG8_078

3D structure

PDB id

5NG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

CUUUGAAACGUGAG*CUUACGUGGAG

Length

25 nucleotides

Bulged bases

5NG8|1|AA|U|2158, 5NG8|1|AA|U|2159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NG8|1|AA|C|2156
5NG8|1|AA|U|2157
5NG8|1|AA|U|2158
5NG8|1|AA|U|2159
5NG8|1|AA|G|2160
5NG8|1|AA|A|2161
5NG8|1|AA|A|2162
5NG8|1|AA|A|2163
5NG8|1|AA|C|2164
5NG8|1|AA|G|2165
5NG8|1|AA|U|2166
5NG8|1|AA|G|2167
5NG8|1|AA|A|2168
5NG8|1|AA|G|2169
*
5NG8|1|AA|C|2176
5NG8|1|AA|U|2177
5NG8|1|AA|U|2178
5NG8|1|AA|A|2179
5NG8|1|AA|C|2180
5NG8|1|AA|G|2181
5NG8|1|AA|U|2182
5NG8|1|AA|G|2183
5NG8|1|AA|G|2184
5NG8|1|AA|A|2185
5NG8|1|AA|G|2186

Current chains

Chain AA

23S ribosomal RNA

Nearby chains