IL_5NO2_076

3D structure

PDB id

5NO2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.16 Å

Loop

Sequence

AAAGAAG*CCACUU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NO2|1|A|A|1429
5NO2|1|A|A|1430
5NO2|1|A|A|1431
5NO2|1|A|G|1432
5NO2|1|A|A|1433
5NO2|1|A|A|1434
5NO2|1|A|G|1435
*
5NO2|1|A|C|1466
5NO2|1|A|C|1467
5NO2|1|A|A|1468
5NO2|1|A|C|1469
5NO2|1|A|U|1470
5NO2|1|A|U|1471

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

30S ribosomal protein S20