IL_5NWY_061
3D structure
- PDB id
- 5NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 5NWY|1|0|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NWY_061 not in the Motif Atlas
- Geometric match to IL_8UO6_002
- Geometric discrepancy: 0.2763
- The information below is about IL_8UO6_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
5NWY|1|0|C|1407
5NWY|1|0|A|1408
5NWY|1|0|C|1409
*
5NWY|1|0|G|1491
5NWY|1|0|A|1492
5NWY|1|0|A|1493
5NWY|1|0|G|1494
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S12
- Chain N
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: