IL_5NWY_070
3D structure
- PDB id
- 5NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 5NWY|1|N|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NWY_070 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.1217
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
5NWY|1|N|G|81
5NWY|1|N|U|82
5NWY|1|N|A|83
5NWY|1|N|A|84
5NWY|1|N|G|85
*
5NWY|1|N|C|97
5NWY|1|N|G|98
5NWY|1|N|U|99
5NWY|1|N|U|100
5NWY|1|N|A|101
5NWY|1|N|U|102
5NWY|1|N|A|103
5NWY|1|N|A|104
5NWY|1|N|C|105
Current chains
- Chain N
- 23S rRNA
Nearby chains
- Chain h
- 50S ribosomal protein L24
- Chain l
- 50S ribosomal protein L29
Coloring options: