IL_5NWY_071
3D structure
- PDB id
- 5NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NWY_071 not in the Motif Atlas
- Homologous match to IL_4WF9_007
- Geometric discrepancy: 0.107
- The information below is about IL_4WF9_007
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_15011.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 48
Unit IDs
5NWY|1|N|C|183
5NWY|1|N|C|184
*
5NWY|1|N|G|212
5NWY|1|N|A|213
5NWY|1|N|G|214
Current chains
- Chain N
- 23S rRNA
Nearby chains
- Chain p
- 50S ribosomal protein L34
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