IL_5NWY_152

3D structure

PDB id

5NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUUGAAGUG*CAUGGAG

Length

17 nucleotides

Bulged bases

5NWY|1|N|U|2131, 5NWY|1|N|U|2132, 5NWY|1|N|G|2133

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NWY|1|N|C|2129
5NWY|1|N|U|2130
5NWY|1|N|U|2131
5NWY|1|N|U|2132
5NWY|1|N|G|2133
5NWY|1|N|A|2134
5NWY|1|N|A|2135
5NWY|1|N|G|2136
5NWY|1|N|U|2137
5NWY|1|N|G|2138
*
5NWY|1|N|C|2153
5NWY|1|N|A|2154
5NWY|1|N|U|2155
5NWY|1|N|G|2156
5NWY|1|N|G|2157
5NWY|1|N|A|2158
5NWY|1|N|G|2159

Current chains

Chain N

23S rRNA

Nearby chains