IL_5NWY_188

3D structure

PDB id

5NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCCUUGA*UUAAUGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NWY|1|N|G|2102
5NWY|1|N|C|2103
5NWY|1|N|C|2104
5NWY|1|N|U|2105
5NWY|1|N|U|2106
5NWY|1|N|G|2107
5NWY|1|N|A|2108
*
5NWY|1|N|U|2181
5NWY|1|N|U|2182
5NWY|1|N|A|2183
5NWY|1|N|A|2184
5NWY|1|N|U|2185
5NWY|1|N|G|2186
5NWY|1|N|U|2187

Current chains

Chain N

23S rRNA

Nearby chains