IL_5O2R_174
3D structure
- PDB id
- 5O2R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCCAGACAGCCA*UGGUCGAG
- Length
- 20 nucleotides
- Bulged bases
- 5O2R|1|A|A|1046
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5O2R|1|A|C|1043
5O2R|1|A|C|1044
5O2R|1|A|C|1045
5O2R|1|A|A|1046
5O2R|1|A|G|1047
5O2R|1|A|A|1048
5O2R|1|A|C|1049
5O2R|1|A|A|1050
5O2R|1|A|G|1051
5O2R|1|A|C|1052
5O2R|1|A|C|1053
5O2R|1|A|A|1054
*
5O2R|1|A|U|1105
5O2R|1|A|G|1106
5O2R|1|A|G|1107
5O2R|1|A|U|1108
5O2R|1|A|C|1109
5O2R|1|A|G|1110
5O2R|1|A|A|1111
5O2R|1|A|G|1112
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain 5
- 50S ribosomal protein L10
- Chain G
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L11
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