IL_5O62_002
3D structure
- PDB id
- 5O62 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the thermobifida fusca guanidine III riboswitch with 1-Ethylguanidine.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.12 Å
Loop
- Sequence
- UAC*GACAAGA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5O62_002 not in the Motif Atlas
- Homologous match to IL_5NWQ_002
- Geometric discrepancy: 0.0352
- The information below is about IL_5NWQ_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52743.1
- Basepair signature
- cWW-tSW-L-cSW-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
5O62|1|A|U|18
5O62|1|A|A|19
5O62|1|A|C|20
*
5O62|1|A|G|29
5O62|1|A|A|30
5O62|1|A|C|31
5O62|1|A|A|32
5O62|1|A|A|33
5O62|1|A|G|34
5O62|1|A|A|35
Current chains
- Chain A
- RNA (41-MER)
Nearby chains
- Chain B
- Guanidine-III riboswitch
Coloring options: